Dca5459.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12092)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5459.1 |
207 |
478 |
479 |
40.7 |
272 |
72 |
5e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
498 |
769 |
896 |
30.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5459.1 |
206 |
478 |
479 |
19.2 |
273 |
34 |
3e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1034 |
1298 |
1428 |
18.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12092 |
Augustus |
mRNA |
266 |
3408 |
. |
- |
. |
ID=Dca5459.1;Parent=Dca5459 |
| scaffold12092 |
Augustus |
exon |
266 |
1089 |
. |
- |
. |
ID=Dca5459.1.exon1;Parent=Dca5459.1 |
| scaffold12092 |
Augustus |
exon |
2793 |
3408 |
. |
- |
. |
ID=Dca5459.1.exon2;Parent=Dca5459.1 |
