Carnation DB

Dca5497.1

Annotation

5-exons
f-1
sp|G7IWF3_MEDTR#PHD-finger family protein expressed#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g025330#GO:0008270#1F0P0C
Repeat List (scaffold1210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5497.1	48	260	292	27.73	213	33	1e-22
Target_name	Start	End	Length	Cov(%)
sp\|G7IWF3_MEDTR	266	509	560	43.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5497.1	41	186	292	17.8	146	34	2e-16
Target_name	Start	End	Length	Cov(%)
Os03t0421000-01	270	419	437	34.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1210	Augustus	mRNA	7170	9267	.	+	.	ID=Dca5497.1;Parent=Dca5497
scaffold1210	Augustus	exon	7170	7236	.	+	.	ID=Dca5497.1.exon1;Parent=Dca5497.1
scaffold1210	Augustus	exon	7568	7682	.	+	.	ID=Dca5497.1.exon2;Parent=Dca5497.1
scaffold1210	Augustus	exon	8370	8600	.	+	.	ID=Dca5497.1.exon3;Parent=Dca5497.1
scaffold1210	Augustus	exon	8688	8797	.	+	.	ID=Dca5497.1.exon4;Parent=Dca5497.1
scaffold1210	Augustus	exon	8912	9267	.	+	.	ID=Dca5497.1.exon5;Parent=Dca5497.1