Dca58358.1
Annotation
- 4-exons
- f-1
- sp|D7LBZ5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_900616#unknown#0F0P0C
- AT2G21870.1 | Symbols: MGP1 | copper ion binding;cobalt ion binding;zinc ion binding | chr2:9320456-9322618 REVERSE LENGTH=240
- Repeat List (scaffold8558)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58358.1 |
1 |
152 |
152 |
54.6 |
152 |
42 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LBZ5_ARALL |
46 |
240 |
240 |
81.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58358.1 |
1 |
152 |
152 |
55.26 |
152 |
42 |
3e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G21870.1 |
46 |
240 |
240 |
81.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8558 |
Augustus |
mRNA |
3859 |
7849 |
. |
+ |
. |
ID=Dca58358.1;Parent=Dca58358 |
| scaffold8558 |
Augustus |
exon |
3859 |
4001 |
. |
+ |
. |
ID=Dca58358.1.exon1;Parent=Dca58358.1 |
| scaffold8558 |
Augustus |
exon |
4545 |
4655 |
. |
+ |
. |
ID=Dca58358.1.exon2;Parent=Dca58358.1 |
| scaffold8558 |
Augustus |
exon |
7502 |
7642 |
. |
+ |
. |
ID=Dca58358.1.exon3;Parent=Dca58358.1 |
| scaffold8558 |
Augustus |
exon |
7786 |
7849 |
. |
+ |
. |
ID=Dca58358.1.exon4;Parent=Dca58358.1 |
