Dca8773.1
Annotation
- 2-exons
- f-1
- sp|Q10IL4_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g33850#GO:0003676#1F0P0C
- Repeat List (scaffold13736)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8773.1 |
1 |
189 |
193 |
56.99 |
189 |
59 |
9e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10IL4_ORYSJ |
373 |
560 |
562 |
33.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8773.1 |
63 |
172 |
193 |
23.83 |
110 |
42 |
4e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1271 |
1378 |
1401 |
7.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13736 |
Augustus |
mRNA |
4595 |
5352 |
. |
+ |
. |
ID=Dca8773.1;Parent=Dca8773 |
| scaffold13736 |
Augustus |
exon |
4595 |
4772 |
. |
+ |
. |
ID=Dca8773.1.exon1;Parent=Dca8773.1 |
| scaffold13736 |
Augustus |
exon |
4949 |
5352 |
. |
+ |
. |
ID=Dca8773.1.exon2;Parent=Dca8773.1 |
