Dca8981.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold13828)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8981.1 |
19 |
320 |
641 |
33.07 |
302 |
69 |
6e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
447 |
756 |
1717 |
18.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8981.1 |
22 |
158 |
641 |
6.55 |
137 |
31 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
58 |
189 |
192 |
68.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13828 |
Augustus |
mRNA |
112 |
5007 |
. |
+ |
. |
ID=Dca8981.1;Parent=Dca8981 |
| scaffold13828 |
Augustus |
exon |
112 |
1355 |
. |
+ |
. |
ID=Dca8981.1.exon1;Parent=Dca8981.1 |
| scaffold13828 |
Augustus |
exon |
3852 |
3916 |
. |
+ |
. |
ID=Dca8981.1.exon2;Parent=Dca8981.1 |
| scaffold13828 |
Augustus |
exon |
4391 |
5007 |
. |
+ |
. |
ID=Dca8981.1.exon3;Parent=Dca8981.1 |
