Carnation DB

Dca1004.1

Annotation

6-exons
f-1
sp|F6H666_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0091g00660#unknown#0F0P0C
Repeat List (scaffold1028)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1004.1	1	644	662	53.47	644	55	8e-162
Target_name	Start	End	Length	Cov(%)
sp\|F6H666_VITVI	2	592	604	97.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1004.1	1	661	662	52.41	661	50	5e-146
Target_name	Start	End	Length	Cov(%)
AT1G49890.1	2	651	659	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1028	Augustus	mRNA	1487	5980	.	+	.	ID=Dca1004.1;Parent=Dca1004
scaffold1028	Augustus	exon	1487	2980	.	+	.	ID=Dca1004.1.exon1;Parent=Dca1004.1
scaffold1028	Augustus	exon	3823	3942	.	+	.	ID=Dca1004.1.exon2;Parent=Dca1004.1
scaffold1028	Augustus	exon	4504	4620	.	+	.	ID=Dca1004.1.exon3;Parent=Dca1004.1
scaffold1028	Augustus	exon	4718	4807	.	+	.	ID=Dca1004.1.exon4;Parent=Dca1004.1
scaffold1028	Augustus	exon	5709	5816	.	+	.	ID=Dca1004.1.exon5;Parent=Dca1004.1
scaffold1028	Augustus	exon	5921	5980	.	+	.	ID=Dca1004.1.exon6;Parent=Dca1004.1