Dca1021.1
Annotation
- 4-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1028)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1021.1 |
1 |
1334 |
1334 |
47.9 |
1334 |
43 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
16 |
1501 |
1501 |
99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1021.1 |
500 |
1324 |
1334 |
22.26 |
825 |
36 |
5e-151
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
578 |
1389 |
1401 |
57.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1028 |
Augustus |
mRNA |
107713 |
112109 |
. |
- |
. |
ID=Dca1021.1;Parent=Dca1021 |
| scaffold1028 |
Augustus |
exon |
107713 |
109247 |
. |
- |
. |
ID=Dca1021.1.exon1;Parent=Dca1021.1 |
| scaffold1028 |
Augustus |
exon |
109338 |
110313 |
. |
- |
. |
ID=Dca1021.1.exon2;Parent=Dca1021.1 |
| scaffold1028 |
Augustus |
exon |
110499 |
110714 |
. |
- |
. |
ID=Dca1021.1.exon3;Parent=Dca1021.1 |
| scaffold1028 |
Augustus |
exon |
110832 |
112109 |
. |
- |
. |
ID=Dca1021.1.exon4;Parent=Dca1021.1 |
