Dca10786.1
Annotation
- 2-exons
- f-1
- sp|Q9SIQ5_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g31520#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1477)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10786.1 |
8 |
112 |
122 |
30.32 |
105 |
35 |
9e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SIQ5_ARATH |
1152 |
1257 |
1524 |
6.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10786.1 |
10 |
112 |
122 |
29.5 |
103 |
34 |
6e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G29090.1 |
208 |
312 |
575 |
18.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1477 |
Augustus |
mRNA |
22664 |
24595 |
. |
- |
. |
ID=Dca10786.1;Parent=Dca10786 |
| scaffold1477 |
Augustus |
exon |
22664 |
23003 |
. |
- |
. |
ID=Dca10786.1.exon1;Parent=Dca10786.1 |
| scaffold1477 |
Augustus |
exon |
24567 |
24595 |
. |
- |
. |
ID=Dca10786.1.exon2;Parent=Dca10786.1 |
