Dca10846.1
Annotation
- 3-exons
- f-1
- sp|B9H5H9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1079894#GO:0005524;GO:0004674#2F0P0C
- AT1G12680.1 | Symbols: PEPKR2 | phosphoenolpyruvate carboxylase-related kinase 2 | chr1:4320123-4322269 REVERSE LENGTH=470
- Repeat List (scaffold148)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10846.1 |
4 |
477 |
477 |
60.79 |
474 |
61 |
1e-161
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H5H9_POPTR |
2 |
469 |
469 |
99.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10846.1 |
4 |
477 |
477 |
57.44 |
474 |
56 |
8e-150
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G12680.1 |
2 |
470 |
470 |
99.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold148 |
Augustus |
mRNA |
180665 |
183481 |
. |
+ |
. |
ID=Dca10846.1;Parent=Dca10846 |
| scaffold148 |
Augustus |
exon |
180665 |
181445 |
. |
+ |
. |
ID=Dca10846.1.exon1;Parent=Dca10846.1 |
| scaffold148 |
Augustus |
exon |
182246 |
182542 |
. |
+ |
. |
ID=Dca10846.1.exon2;Parent=Dca10846.1 |
| scaffold148 |
Augustus |
exon |
183126 |
183481 |
. |
+ |
. |
ID=Dca10846.1.exon3;Parent=Dca10846.1 |
