Dca10937.1
Annotation
- 1-exons
- r-471
- sp|B9S0M5_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1356410#GO:0008168#1F0P0C
- AT3G53400.1 | Symbols: | BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr3:19798526-19799926 FORWARD LENGTH=466
- Repeat List (scaffold14840)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10937.1 |
13 |
474 |
475 |
49.05 |
462 |
50 |
2e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9S0M5_RICCO |
3 |
459 |
460 |
99.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10937.1 |
12 |
473 |
475 |
46.1 |
462 |
46 |
7e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G53400.1 |
2 |
464 |
466 |
99.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14840 |
Augus-PASA |
mRNA |
1640 |
3803 |
. |
+ |
. |
ID=Dca10937.1;Parent=Dca10937 |
| scaffold14840 |
Augus-PASA |
exon |
1640 |
3803 |
. |
+ |
. |
ID=Dca10937.1.exon1;Parent=Dca10937.1 |
