Carnation DB

Dca1114.1

Annotation

8-exons
f-2
sp|A5AGB3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_006396#GO:0004190;GO:0005524;GO:0004674;GO:0006508#3F1P0C
AT1G56130.1 | Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:20994931-21000887 REVERSE LENGTH=1032
Repeat List (scaffold10303)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1114.1	5	571	586	63.65	567	65	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AGB3_VITVI	346	922	1133	50.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1114.1	4	557	586	58.7	554	61	0
Target_name	Start	End	Length	Cov(%)
AT1G56130.1	425	987	1032	54.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10303	Augustus	mRNA	7627	11698	.	-	.	ID=Dca1114.1;Parent=Dca1114
scaffold10303	Augustus	exon	7627	7953	.	-	.	ID=Dca1114.1.exon1;Parent=Dca1114.1
scaffold10303	Augustus	exon	8236	8386	.	-	.	ID=Dca1114.1.exon2;Parent=Dca1114.1
scaffold10303	Augustus	exon	9185	9416	.	-	.	ID=Dca1114.1.exon3;Parent=Dca1114.1
scaffold10303	Augustus	exon	9507	9717	.	-	.	ID=Dca1114.1.exon4;Parent=Dca1114.1
scaffold10303	Augustus	exon	9970	10082	.	-	.	ID=Dca1114.1.exon5;Parent=Dca1114.1
scaffold10303	Augustus	exon	10294	10443	.	-	.	ID=Dca1114.1.exon6;Parent=Dca1114.1
scaffold10303	Augustus	exon	10561	10759	.	-	.	ID=Dca1114.1.exon7;Parent=Dca1114.1
scaffold10303	Augustus	exon	11320	11698	.	-	.	ID=Dca1114.1.exon8;Parent=Dca1114.1