Dca1157.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1032)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1157.1 |
1 |
295 |
296 |
58.44 |
295 |
52 |
1e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
571 |
908 |
1038 |
32.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1157.1 |
224 |
296 |
296 |
12.16 |
73 |
50 |
4e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
887 |
956 |
1401 |
4.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1032 |
Augustus |
mRNA |
49165 |
50162 |
. |
- |
. |
ID=Dca1157.1;Parent=Dca1157 |
| scaffold1032 |
Augustus |
exon |
49165 |
49579 |
. |
- |
. |
ID=Dca1157.1.exon1;Parent=Dca1157.1 |
| scaffold1032 |
Augustus |
exon |
49687 |
50162 |
. |
- |
. |
ID=Dca1157.1.exon2;Parent=Dca1157.1 |
