Carnation DB

Dca1169.1

Annotation

5-exons
f-1
sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold10324)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1169.1	388	462	527	10.62	75	75	3e-28
Target_name	Start	End	Length	Cov(%)
sp\|Q6L3N8_SOLDE	598	672	1333	5.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1169.1	388	462	527	8.34	75	59	2e-22
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	649	723	1428	5.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10324	Augustus	mRNA	5923	8345	.	+	.	ID=Dca1169.1;Parent=Dca1169
scaffold10324	Augustus	exon	5923	5972	.	+	.	ID=Dca1169.1.exon1;Parent=Dca1169.1
scaffold10324	Augustus	exon	6091	6170	.	+	.	ID=Dca1169.1.exon2;Parent=Dca1169.1
scaffold10324	Augustus	exon	6335	7353	.	+	.	ID=Dca1169.1.exon3;Parent=Dca1169.1
scaffold10324	Augustus	exon	7707	7925	.	+	.	ID=Dca1169.1.exon4;Parent=Dca1169.1
scaffold10324	Augustus	exon	8130	8345	.	+	.	ID=Dca1169.1.exon5;Parent=Dca1169.1