Dca12028.1
Annotation
- 2-exons
- f-1
- sp|Q9SLF0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16670#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1544)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12028.1 |
1 |
182 |
182 |
56.59 |
182 |
50 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SLF0_ARATH |
931 |
1136 |
1333 |
15.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12028.1 |
1 |
182 |
182 |
44.5 |
182 |
39 |
5e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
193 |
403 |
1262 |
16.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1544 |
Augustus |
mRNA |
62012 |
62630 |
. |
- |
. |
ID=Dca12028.1;Parent=Dca12028 |
| scaffold1544 |
Augustus |
exon |
62012 |
62467 |
. |
- |
. |
ID=Dca12028.1.exon1;Parent=Dca12028.1 |
| scaffold1544 |
Augustus |
exon |
62538 |
62630 |
. |
- |
. |
ID=Dca12028.1.exon2;Parent=Dca12028.1 |
