Dca12172.1
Annotation
- 3-exons
- f-1
- sp|B4FSW0_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#unknown#0F0P0C
- AT4G25740.1 | Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=177
- Repeat List (scaffold1553)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12172.1 |
120 |
256 |
264 |
35.98 |
137 |
64 |
8e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B4FSW0_MAIZE |
12 |
155 |
179 |
80.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12172.1 |
129 |
257 |
264 |
36.74 |
129 |
72 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G25740.1 |
16 |
150 |
177 |
76.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1553 |
Augustus |
mRNA |
47765 |
49087 |
. |
- |
. |
ID=Dca12172.1;Parent=Dca12172 |
| scaffold1553 |
Augustus |
exon |
47765 |
47891 |
. |
- |
. |
ID=Dca12172.1.exon1;Parent=Dca12172.1 |
| scaffold1553 |
Augustus |
exon |
47990 |
48266 |
. |
- |
. |
ID=Dca12172.1.exon2;Parent=Dca12172.1 |
| scaffold1553 |
Augustus |
exon |
48697 |
49087 |
. |
- |
. |
ID=Dca12172.1.exon3;Parent=Dca12172.1 |
