Dca12247.1
Annotation
- 4-exons
- f-1
- sp|B9HBI5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_562052#GO:0005488#1F0P0C
- AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
- Repeat List (scaffold15588)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12247.1 |
20 |
261 |
399 |
19.54 |
242 |
30 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HBI5_POPTR |
259 |
525 |
597 |
44.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12247.1 |
1 |
264 |
399 |
28.32 |
264 |
37 |
9e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G12700.1 |
79 |
383 |
735 |
41.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15588 |
Augustus |
mRNA |
1978 |
4378 |
. |
+ |
. |
ID=Dca12247.1;Parent=Dca12247 |
| scaffold15588 |
Augustus |
exon |
1978 |
2671 |
. |
+ |
. |
ID=Dca12247.1.exon1;Parent=Dca12247.1 |
| scaffold15588 |
Augustus |
exon |
2742 |
2839 |
. |
+ |
. |
ID=Dca12247.1.exon2;Parent=Dca12247.1 |
| scaffold15588 |
Augustus |
exon |
3538 |
3584 |
. |
+ |
. |
ID=Dca12247.1.exon3;Parent=Dca12247.1 |
| scaffold15588 |
Augustus |
exon |
4018 |
4378 |
. |
+ |
. |
ID=Dca12247.1.exon4;Parent=Dca12247.1 |
