Carnation DB

Dca12297.1

Annotation

6-exons
f-1
sp|D7SKJ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04360#GO:0016597;GO:0008152#1F1P0C
AT2G39570.1 | Symbols: | ACT domain-containing protein | chr2:16507963-16509741 FORWARD LENGTH=411
Repeat List (scaffold156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12297.1	3	423	423	69.5	421	70	3e-170
Target_name	Start	End	Length	Cov(%)
sp\|D7SKJ2_VITVI	2	420	420	99.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12297.1	1	423	423	57.91	423	58	2e-134
Target_name	Start	End	Length	Cov(%)
AT2G39570.1	1	411	411	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold156	Augus-PASA	mRNA	200546	202762	.	-	.	ID=Dca12297.1;Parent=Dca12297
scaffold156	Augus-PASA	exon	200546	200692	.	-	.	ID=Dca12297.1.exon1;Parent=Dca12297.1
scaffold156	Augus-PASA	exon	200806	201090	.	-	.	ID=Dca12297.1.exon2;Parent=Dca12297.1
scaffold156	Augus-PASA	exon	201638	201989	.	-	.	ID=Dca12297.1.exon3;Parent=Dca12297.1
scaffold156	Augus-PASA	exon	202087	202192	.	-	.	ID=Dca12297.1.exon4;Parent=Dca12297.1
scaffold156	Augus-PASA	exon	202284	202499	.	-	.	ID=Dca12297.1.exon5;Parent=Dca12297.1
scaffold156	Augus-PASA	exon	202597	202762	.	-	.	ID=Dca12297.1.exon6;Parent=Dca12297.1