Carnation DB

Dca12304.1

Annotation

6-exons
f-1
sp|B9SR14_RICCO#Ubiquitin-conjugating enzyme E2 G, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0464270#GO:0005524;GO:0004842#2F0P0C
Repeat List (scaffold156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12304.1	3	168	168	85.11	166	87	7e-85
Target_name	Start	End	Length	Cov(%)
sp\|B9SR14_RICCO	2	167	167	99.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12304.1	4	168	168	89.28	165	91	7e-82
Target_name	Start	End	Length	Cov(%)
AT5G59300.1	39	203	203	81.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold156	Augus-PASA	mRNA	238897	241075	.	-	.	ID=Dca12304.1;Parent=Dca12304
scaffold156	Augus-PASA	exon	238897	238974	.	-	.	ID=Dca12304.1.exon1;Parent=Dca12304.1
scaffold156	Augus-PASA	exon	239435	239512	.	-	.	ID=Dca12304.1.exon2;Parent=Dca12304.1
scaffold156	Augus-PASA	exon	239767	239867	.	-	.	ID=Dca12304.1.exon3;Parent=Dca12304.1
scaffold156	Augus-PASA	exon	239957	240054	.	-	.	ID=Dca12304.1.exon4;Parent=Dca12304.1
scaffold156	Augus-PASA	exon	240780	240882	.	-	.	ID=Dca12304.1.exon5;Parent=Dca12304.1
scaffold156	Augus-PASA	exon	241027	241075	.	-	.	ID=Dca12304.1.exon6;Parent=Dca12304.1