Dca12325.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold15608)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12325.1 |
1 |
88 |
235 |
19.57 |
88 |
53 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
45 |
132 |
964 |
9.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12325.1 |
162 |
235 |
235 |
11.06 |
74 |
36 |
4e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
889 |
959 |
1428 |
4.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15608 |
Augustus |
mRNA |
4428 |
5744 |
. |
+ |
. |
ID=Dca12325.1;Parent=Dca12325 |
| scaffold15608 |
Augustus |
exon |
4428 |
4686 |
. |
+ |
. |
ID=Dca12325.1.exon1;Parent=Dca12325.1 |
| scaffold15608 |
Augustus |
exon |
5296 |
5744 |
. |
+ |
. |
ID=Dca12325.1.exon2;Parent=Dca12325.1 |
