Carnation DB

Dca12392.1

Annotation

9-exons
f-1
sp|D7TZ55_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g00140#unknown#0F0P0C
sp|B9RWS8_RICCO#Nucleotide binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1023990#unknown#0F0P0C
Repeat List (scaffold1566)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12392.1	1	634	643	70.13	634	71	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TZ55_VITVI	1	641	773	82.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12392.1	1	634	643	54.27	634	52	5e-171
Target_name	Start	End	Length	Cov(%)
AT1G04140.2	1	657	793	82.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1566	Augus-PASA	mRNA	37897	43026	.	+	.	ID=Dca12392.1;Parent=Dca12392
scaffold1566	Augus-PASA	exon	37897	38003	.	+	.	ID=Dca12392.1.exon1;Parent=Dca12392.1
scaffold1566	Augus-PASA	exon	38814	38966	.	+	.	ID=Dca12392.1.exon2;Parent=Dca12392.1
scaffold1566	Augustus	exon	39117	39233	.	+	.	ID=Dca12392.1.exon3;Parent=Dca12392.1
scaffold1566	Augustus	exon	39321	39405	.	+	.	ID=Dca12392.1.exon4;Parent=Dca12392.1
scaffold1566	Augustus	exon	40725	40833	.	+	.	ID=Dca12392.1.exon5;Parent=Dca12392.1
scaffold1566	Augustus	exon	40982	41049	.	+	.	ID=Dca12392.1.exon6;Parent=Dca12392.1
scaffold1566	Augustus	exon	41133	41258	.	+	.	ID=Dca12392.1.exon7;Parent=Dca12392.1
scaffold1566	Augustus	exon	41340	42268	.	+	.	ID=Dca12392.1.exon8;Parent=Dca12392.1
scaffold1566	Augustus	exon	42789	43026	.	+	.	ID=Dca12392.1.exon9;Parent=Dca12392.1