Dca12416.1
Annotation
- 3-exons
- f-1
- sp|A5B230_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_026075#GO:0003676;GO:0008270#2F0P0C
- Os05t0576300-01 Zinc finger, CCCH-type domain containing protein.
- Repeat List (scaffold1568)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12416.1 |
80 |
270 |
271 |
31.36 |
191 |
40 |
9e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B230_VITVI |
91 |
294 |
300 |
68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12416.1 |
110 |
140 |
271 |
7.38 |
31 |
65 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0576300-01 |
269 |
299 |
344 |
9.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1568 |
Augustus |
mRNA |
41584 |
44428 |
. |
+ |
. |
ID=Dca12416.1;Parent=Dca12416 |
| scaffold1568 |
Augustus |
exon |
41584 |
41976 |
. |
+ |
. |
ID=Dca12416.1.exon1;Parent=Dca12416.1 |
| scaffold1568 |
Augustus |
exon |
43886 |
43951 |
. |
+ |
. |
ID=Dca12416.1.exon2;Parent=Dca12416.1 |
| scaffold1568 |
Augustus |
exon |
44072 |
44428 |
. |
+ |
. |
ID=Dca12416.1.exon3;Parent=Dca12416.1 |
