Dca12435.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold15699)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12435.1 |
23 |
72 |
285 |
13.68 |
50 |
78 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
474 |
523 |
896 |
5.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12435.1 |
5 |
57 |
285 |
8.77 |
53 |
48 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
967 |
1019 |
1401 |
3.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15699 |
Augustus |
mRNA |
2977 |
4315 |
. |
- |
. |
ID=Dca12435.1;Parent=Dca12435 |
| scaffold15699 |
Augustus |
exon |
2977 |
3361 |
. |
- |
. |
ID=Dca12435.1.exon1;Parent=Dca12435.1 |
| scaffold15699 |
Augustus |
exon |
3449 |
3726 |
. |
- |
. |
ID=Dca12435.1.exon2;Parent=Dca12435.1 |
| scaffold15699 |
Augustus |
exon |
4121 |
4315 |
. |
- |
. |
ID=Dca12435.1.exon3;Parent=Dca12435.1 |
