Carnation DB

Dca12458.1

Annotation

5-exons
f-1
sp|B7FLA0_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#unknown#unknown#0F0P0C
Os08t0538600-01 Stress up-regulated Nod 19 family protein.
Repeat List (scaffold157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12458.1	10	344	392	47.7	335	46	5e-99
Target_name	Start	End	Length	Cov(%)
sp\|B7FLA0_MEDTR	10	419	420	97.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12458.1	186	343	392	21.93	158	55	1e-44
Target_name	Start	End	Length	Cov(%)
Os08t0538600-01	251	406	425	36.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold157	Augustus	mRNA	245065	246690	.	+	.	ID=Dca12458.1;Parent=Dca12458
scaffold157	Augustus	exon	245065	245621	.	+	.	ID=Dca12458.1.exon1;Parent=Dca12458.1
scaffold157	Augustus	exon	245814	245886	.	+	.	ID=Dca12458.1.exon2;Parent=Dca12458.1
scaffold157	Augus-PASA	exon	245970	246128	.	+	.	ID=Dca12458.1.exon3;Parent=Dca12458.1
scaffold157	Augus-PASA	exon	246215	246469	.	+	.	ID=Dca12458.1.exon4;Parent=Dca12458.1
scaffold157	Augus-PASA	exon	246556	246690	.	+	.	ID=Dca12458.1.exon5;Parent=Dca12458.1