Carnation DB

Dca12478.1

Annotation

14-exons
f-1
sp|F6HLK6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g06250#GO:0016021;GO:0005524;GO:0004672#2F0P1C
sp|B9T272_RICCO#Receptor protein kinase CLAVATA1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0413570#GO:0016021;GO:0005524;GO:0004672;GO:0004872#3F0P1C
Repeat List (scaffold1571)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12478.1	2	726	727	52.13	725	52	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HLK6_VITVI	46	737	738	93.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12478.1	1	726	727	48.41	726	48	7e-177
Target_name	Start	End	Length	Cov(%)
AT5G06820.1	33	734	735	95.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1571	Augustus	mRNA	33386	37054	.	-	.	ID=Dca12478.1;Parent=Dca12478
scaffold1571	Augustus	exon	33386	33550	.	-	.	ID=Dca12478.1.exon1;Parent=Dca12478.1
scaffold1571	Augustus	exon	33757	33913	.	-	.	ID=Dca12478.1.exon2;Parent=Dca12478.1
scaffold1571	Augustus	exon	34004	34143	.	-	.	ID=Dca12478.1.exon3;Parent=Dca12478.1
scaffold1571	Augustus	exon	34356	34500	.	-	.	ID=Dca12478.1.exon4;Parent=Dca12478.1
scaffold1571	Augustus	exon	34592	34857	.	-	.	ID=Dca12478.1.exon5;Parent=Dca12478.1
scaffold1571	Augustus	exon	34959	35227	.	-	.	ID=Dca12478.1.exon6;Parent=Dca12478.1
scaffold1571	Augustus	exon	35324	35652	.	-	.	ID=Dca12478.1.exon7;Parent=Dca12478.1
scaffold1571	Augustus	exon	35728	35793	.	-	.	ID=Dca12478.1.exon8;Parent=Dca12478.1
scaffold1571	Augustus	exon	35882	35947	.	-	.	ID=Dca12478.1.exon9;Parent=Dca12478.1
scaffold1571	Augustus	exon	36038	36109	.	-	.	ID=Dca12478.1.exon10;Parent=Dca12478.1
scaffold1571	Augustus	exon	36213	36463	.	-	.	ID=Dca12478.1.exon11;Parent=Dca12478.1
scaffold1571	Augustus	exon	36564	36618	.	-	.	ID=Dca12478.1.exon12;Parent=Dca12478.1
scaffold1571	Augustus	exon	36765	36836	.	-	.	ID=Dca12478.1.exon13;Parent=Dca12478.1
scaffold1571	Augustus	exon	36924	37054	.	-	.	ID=Dca12478.1.exon14;Parent=Dca12478.1