Dca12540.1
Annotation
- 2-exons
- f-1
- sp|B9H540_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_760118#unknown#0F0P0C
- Os02t0753300-01 Lipoxygenase, LH2 domain containing protein.
- Repeat List (scaffold1575)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12540.1 |
23 |
141 |
142 |
40.84 |
119 |
49 |
8e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H540_POPTR |
23 |
141 |
169 |
70.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12540.1 |
24 |
141 |
142 |
35.21 |
118 |
42 |
9e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0753300-01 |
53 |
170 |
194 |
60.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1575 |
Augus-PASA |
mRNA |
71343 |
72556 |
. |
+ |
. |
ID=Dca12540.1;Parent=Dca12540 |
| scaffold1575 |
Augus-PASA |
exon |
71343 |
71408 |
. |
+ |
. |
ID=Dca12540.1.exon1;Parent=Dca12540.1 |
| scaffold1575 |
Augus-PASA |
exon |
72194 |
72556 |
. |
+ |
. |
ID=Dca12540.1.exon2;Parent=Dca12540.1 |
