Carnation DB

Dca12959.1

Annotation

5-exons
f-1
sp|D7SZK6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01460#GO:0005488#1F0P0C
Os10t0471400-01 Tetratricopeptide-like helical domain containing protein.
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12959.1	18	770	770	57.66	753	59	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SZK6_VITVI	11	725	725	98.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12959.1	15	770	770	48.7	756	50	0
Target_name	Start	End	Length	Cov(%)
Os10t0471400-01	9	727	728	98.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	177951	181654	.	+	.	ID=Dca12959.1;Parent=Dca12959
scaffold16	Augustus	exon	177951	178211	.	+	.	ID=Dca12959.1.exon1;Parent=Dca12959.1
scaffold16	Augustus	exon	178993	179356	.	+	.	ID=Dca12959.1.exon2;Parent=Dca12959.1
scaffold16	Augustus	exon	179810	181026	.	+	.	ID=Dca12959.1.exon3;Parent=Dca12959.1
scaffold16	Augustus	exon	181106	181256	.	+	.	ID=Dca12959.1.exon4;Parent=Dca12959.1
scaffold16	Augustus	exon	181335	181654	.	+	.	ID=Dca12959.1.exon5;Parent=Dca12959.1