Carnation DB

Dca13028.1

Annotation

5-exons
f-1
sp|B9HG99_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1081730#GO:0016021;GO:0008219#0F1P1C
AT4G02600.1 | Symbols: MLO1, ATMLO1 | Seven transmembrane MLO family protein | chr4:1144141-1147156 FORWARD LENGTH=526
Repeat List (scaffold160)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13028.1	4	162	218	29.81	159	39	1e-25
Target_name	Start	End	Length	Cov(%)
sp\|B9HG99_POPTR	3	170	481	34.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13028.1	6	162	218	29.35	157	36	7e-23
Target_name	Start	End	Length	Cov(%)
AT4G02600.1	7	184	526	33.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold160	Augustus	mRNA	144341	149800	.	+	.	ID=Dca13028.1;Parent=Dca13028
scaffold160	Augustus	exon	144341	144460	.	+	.	ID=Dca13028.1.exon1;Parent=Dca13028.1
scaffold160	Augustus	exon	144846	145094	.	+	.	ID=Dca13028.1.exon2;Parent=Dca13028.1
scaffold160	Augustus	exon	145480	145596	.	+	.	ID=Dca13028.1.exon3;Parent=Dca13028.1
scaffold160	Augustus	exon	149509	149556	.	+	.	ID=Dca13028.1.exon4;Parent=Dca13028.1
scaffold160	Augustus	exon	149678	149800	.	+	.	ID=Dca13028.1.exon5;Parent=Dca13028.1