Dca13377.1
Annotation
- 3-exons
- f-1
- sp|Q10G10_ORYSJ#Transposon protein, putative, Mutator sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g44590#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
- Repeat List (scaffold1621)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13377.1 |
47 |
121 |
150 |
18 |
75 |
36 |
4e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10G10_ORYSJ |
533 |
607 |
983 |
7.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13377.1 |
59 |
130 |
150 |
19.33 |
72 |
41 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0256400-01 |
69 |
136 |
365 |
18.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1621 |
Augustus |
mRNA |
49077 |
51973 |
. |
- |
. |
ID=Dca13377.1;Parent=Dca13377 |
| scaffold1621 |
Augustus |
exon |
49077 |
49163 |
. |
- |
. |
ID=Dca13377.1.exon1;Parent=Dca13377.1 |
| scaffold1621 |
Augustus |
exon |
51182 |
51399 |
. |
- |
. |
ID=Dca13377.1.exon2;Parent=Dca13377.1 |
| scaffold1621 |
Augustus |
exon |
51826 |
51973 |
. |
- |
. |
ID=Dca13377.1.exon3;Parent=Dca13377.1 |
