Carnation DB

Dca1364.1

Annotation

6-exons
f-1
sp|B9GNW0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1072015#unknown#0F0P0C
Os01t0772400-00 Streptomyces cyclase/dehydrase family protein.
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1364.1	14	217	231	56.27	204	64	3e-69
Target_name	Start	End	Length	Cov(%)
sp\|B9GNW0_POPTR	20	223	249	81.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1364.1	67	217	231	50.64	151	78	2e-67
Target_name	Start	End	Length	Cov(%)
Os01t0772400-00	81	231	258	58.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augus-PASA	mRNA	33694	35906	.	-	.	ID=Dca1364.1;Parent=Dca1364
scaffold104	Augus-PASA	exon	33694	33713	.	-	.	ID=Dca1364.1.exon1;Parent=Dca1364.1
scaffold104	Augustus	exon	33929	33956	.	-	.	ID=Dca1364.1.exon2;Parent=Dca1364.1
scaffold104	Augustus	exon	34130	34168	.	-	.	ID=Dca1364.1.exon3;Parent=Dca1364.1
scaffold104	Augus-PASA	exon	34337	34468	.	-	.	ID=Dca1364.1.exon4;Parent=Dca1364.1
scaffold104	Augus-PASA	exon	35203	35398	.	-	.	ID=Dca1364.1.exon5;Parent=Dca1364.1
scaffold104	Augustus	exon	35626	35906	.	-	.	ID=Dca1364.1.exon6;Parent=Dca1364.1