Carnation DB

Dca13852.1

Annotation

21-exons
f-1
sp|B9H656_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818360#GO:0000042#0F1P0C
AT5G66030.1 | Symbols: ATGRIP, GRIP | Golgi-localized GRIP domain-containing protein | chr5:26405133-26409888 REVERSE LENGTH=788
Repeat List (scaffold1647)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13852.1	2	739	739	61.97	738	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H656_POPTR	36	791	791	95.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13852.1	12	739	739	59.13	728	57	0
Target_name	Start	End	Length	Cov(%)
AT5G66030.1	22	788	788	97.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1647	Augustus	mRNA	34143	44901	.	+	.	ID=Dca13852.1;Parent=Dca13852
scaffold1647	Augustus	exon	34143	34446	.	+	.	ID=Dca13852.1.exon1;Parent=Dca13852.1
scaffold1647	Augustus	exon	34580	34695	.	+	.	ID=Dca13852.1.exon2;Parent=Dca13852.1
scaffold1647	Augustus	exon	35220	35389	.	+	.	ID=Dca13852.1.exon3;Parent=Dca13852.1
scaffold1647	Augustus	exon	36959	37052	.	+	.	ID=Dca13852.1.exon4;Parent=Dca13852.1
scaffold1647	Augustus	exon	37901	37987	.	+	.	ID=Dca13852.1.exon5;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	38116	38196	.	+	.	ID=Dca13852.1.exon6;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	38778	38903	.	+	.	ID=Dca13852.1.exon7;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	39437	39545	.	+	.	ID=Dca13852.1.exon8;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	39640	39719	.	+	.	ID=Dca13852.1.exon9;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	41038	41166	.	+	.	ID=Dca13852.1.exon10;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	41334	41434	.	+	.	ID=Dca13852.1.exon11;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	41836	41969	.	+	.	ID=Dca13852.1.exon12;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	42069	42166	.	+	.	ID=Dca13852.1.exon13;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	42249	42368	.	+	.	ID=Dca13852.1.exon14;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	42840	42867	.	+	.	ID=Dca13852.1.exon15;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	42968	43020	.	+	.	ID=Dca13852.1.exon16;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	43523	43594	.	+	.	ID=Dca13852.1.exon17;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	43835	43882	.	+	.	ID=Dca13852.1.exon18;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	44239	44344	.	+	.	ID=Dca13852.1.exon19;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	44480	44538	.	+	.	ID=Dca13852.1.exon20;Parent=Dca13852.1
scaffold1647	Augus-PASA	exon	44797	44901	.	+	.	ID=Dca13852.1.exon21;Parent=Dca13852.1