Dca13978.1
Annotation
- 3-exons
- f-1
- sp|Q2HU05_MEDTR#Integrase, catalytic region#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MtrDRAFT_AC149577g2v1#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1655)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13978.1 |
1 |
1270 |
1272 |
36.71 |
1270 |
36 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2HU05_MEDTR |
48 |
1291 |
1715 |
72.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13978.1 |
606 |
1270 |
1272 |
17.29 |
665 |
33 |
5e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
377 |
972 |
1401 |
42.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1655 |
Augustus |
mRNA |
3247 |
9720 |
. |
- |
. |
ID=Dca13978.1;Parent=Dca13978 |
| scaffold1655 |
Augustus |
exon |
3247 |
3255 |
. |
- |
. |
ID=Dca13978.1.exon1;Parent=Dca13978.1 |
| scaffold1655 |
Augustus |
exon |
5420 |
7432 |
. |
- |
. |
ID=Dca13978.1.exon2;Parent=Dca13978.1 |
| scaffold1655 |
Augustus |
exon |
7924 |
9720 |
. |
- |
. |
ID=Dca13978.1.exon3;Parent=Dca13978.1 |
