Carnation DB

Dca13979.1

Annotation

6-exons
f-1
sp|F6HBR2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0018g00410#GO:0016021;GO:0005216#1F0P1C
AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated channel 8 | chr1:6833885-6836578 REVERSE LENGTH=753
Repeat List (scaffold1655)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13979.1	3	723	723	71.23	721	72	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HBR2_VITVI	27	741	743	96.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13979.1	5	723	723	68.6	719	69	0
Target_name	Start	End	Length	Cov(%)
AT1G19780.1	28	748	753	95.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1655	Augustus	mRNA	15752	18743	.	-	.	ID=Dca13979.1;Parent=Dca13979
scaffold1655	Augustus	exon	15752	16492	.	-	.	ID=Dca13979.1.exon1;Parent=Dca13979.1
scaffold1655	Augustus	exon	16675	16911	.	-	.	ID=Dca13979.1.exon2;Parent=Dca13979.1
scaffold1655	Augustus	exon	17274	17385	.	-	.	ID=Dca13979.1.exon3;Parent=Dca13979.1
scaffold1655	Augustus	exon	17503	17813	.	-	.	ID=Dca13979.1.exon4;Parent=Dca13979.1
scaffold1655	Augustus	exon	17893	18105	.	-	.	ID=Dca13979.1.exon5;Parent=Dca13979.1
scaffold1655	Augustus	exon	18186	18743	.	-	.	ID=Dca13979.1.exon6;Parent=Dca13979.1