Carnation DB

Dca1402.1

Annotation

33-exons
f-1
sp|F6HGY7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g00170#GO:0005086;GO:0005488;GO:0032012#2F1P0C
AT1G01960.1 | Symbols: EDA10 | SEC7-like guanine nucleotide exchange family protein | chr1:330830-337582 REVERSE LENGTH=1750
Repeat List (scaffold1040)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1402.1	1	1808	1808	70.24	1808	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HGY7_VITVI	1	1797	1797	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1402.1	4	1807	1808	64.87	1804	64	0
Target_name	Start	End	Length	Cov(%)
AT3G43300.1	2	1756	1758	99.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1040	Augus-PASA	mRNA	50704	67674	.	-	.	ID=Dca1402.1;Parent=Dca1402
scaffold1040	Augus-PASA	exon	50704	50766	.	-	.	ID=Dca1402.1.exon1;Parent=Dca1402.1
scaffold1040	Augus-PASA	exon	51258	51353	.	-	.	ID=Dca1402.1.exon2;Parent=Dca1402.1
scaffold1040	Augus-PASA	exon	51478	51784	.	-	.	ID=Dca1402.1.exon3;Parent=Dca1402.1
scaffold1040	Augus-PASA	exon	51984	52120	.	-	.	ID=Dca1402.1.exon4;Parent=Dca1402.1
scaffold1040	Augus-PASA	exon	52287	52403	.	-	.	ID=Dca1402.1.exon5;Parent=Dca1402.1
scaffold1040	Augus-PASA	exon	52865	53022	.	-	.	ID=Dca1402.1.exon6;Parent=Dca1402.1
scaffold1040	Augustus	exon	53123	53343	.	-	.	ID=Dca1402.1.exon7;Parent=Dca1402.1
scaffold1040	Augustus	exon	53415	53581	.	-	.	ID=Dca1402.1.exon8;Parent=Dca1402.1
scaffold1040	Augustus	exon	53748	54107	.	-	.	ID=Dca1402.1.exon9;Parent=Dca1402.1
scaffold1040	Augustus	exon	54791	54939	.	-	.	ID=Dca1402.1.exon10;Parent=Dca1402.1
scaffold1040	Augustus	exon	55027	55150	.	-	.	ID=Dca1402.1.exon11;Parent=Dca1402.1
scaffold1040	Augustus	exon	55258	55497	.	-	.	ID=Dca1402.1.exon12;Parent=Dca1402.1
scaffold1040	Augustus	exon	55761	56178	.	-	.	ID=Dca1402.1.exon13;Parent=Dca1402.1
scaffold1040	Augustus	exon	56470	57096	.	-	.	ID=Dca1402.1.exon14;Parent=Dca1402.1
scaffold1040	Augustus	exon	57762	57934	.	-	.	ID=Dca1402.1.exon15;Parent=Dca1402.1
scaffold1040	Augustus	exon	58020	58130	.	-	.	ID=Dca1402.1.exon16;Parent=Dca1402.1
scaffold1040	Augustus	exon	58574	58771	.	-	.	ID=Dca1402.1.exon17;Parent=Dca1402.1
scaffold1040	Augustus	exon	59158	59256	.	-	.	ID=Dca1402.1.exon18;Parent=Dca1402.1
scaffold1040	Augustus	exon	59342	59438	.	-	.	ID=Dca1402.1.exon19;Parent=Dca1402.1
scaffold1040	Augustus	exon	59542	59630	.	-	.	ID=Dca1402.1.exon20;Parent=Dca1402.1
scaffold1040	Augustus	exon	59706	59759	.	-	.	ID=Dca1402.1.exon21;Parent=Dca1402.1
scaffold1040	Augustus	exon	59859	59981	.	-	.	ID=Dca1402.1.exon22;Parent=Dca1402.1
scaffold1040	Augustus	exon	60327	60395	.	-	.	ID=Dca1402.1.exon23;Parent=Dca1402.1
scaffold1040	Augustus	exon	60489	60558	.	-	.	ID=Dca1402.1.exon24;Parent=Dca1402.1
scaffold1040	Augustus	exon	60695	60753	.	-	.	ID=Dca1402.1.exon25;Parent=Dca1402.1
scaffold1040	Augustus	exon	60880	61113	.	-	.	ID=Dca1402.1.exon26;Parent=Dca1402.1
scaffold1040	Augustus	exon	61616	61700	.	-	.	ID=Dca1402.1.exon27;Parent=Dca1402.1
scaffold1040	Augustus	exon	62535	62593	.	-	.	ID=Dca1402.1.exon28;Parent=Dca1402.1
scaffold1040	Augustus	exon	62995	63241	.	-	.	ID=Dca1402.1.exon29;Parent=Dca1402.1
scaffold1040	Augustus	exon	64413	64471	.	-	.	ID=Dca1402.1.exon30;Parent=Dca1402.1
scaffold1040	Augustus	exon	64873	65119	.	-	.	ID=Dca1402.1.exon31;Parent=Dca1402.1
scaffold1040	Augustus	exon	67235	67295	.	-	.	ID=Dca1402.1.exon32;Parent=Dca1402.1
scaffold1040	Augustus	exon	67566	67674	.	-	.	ID=Dca1402.1.exon33;Parent=Dca1402.1