Carnation DB

Dca14240.1

Annotation

19-exons
f-1
sp|F6I157_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g01320#GO:0005488#1F0P0C
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:16599976-16605994 REVERSE LENGTH=1089
Repeat List (scaffold1670)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14240.1	295	1086	1086	46.77	792	61	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I157_VITVI	285	1115	1115	74.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14240.1	391	1085	1086	40.05	695	63	0
Target_name	Start	End	Length	Cov(%)
AT4G34830.1	397	1088	1089	63.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1670	Augustus	mRNA	120388	127840	.	+	.	ID=Dca14240.1;Parent=Dca14240
scaffold1670	Augustus	exon	120388	120714	.	+	.	ID=Dca14240.1.exon1;Parent=Dca14240.1
scaffold1670	Augustus	exon	121074	121809	.	+	.	ID=Dca14240.1.exon2;Parent=Dca14240.1
scaffold1670	Augustus	exon	121941	122109	.	+	.	ID=Dca14240.1.exon3;Parent=Dca14240.1
scaffold1670	Augustus	exon	122449	122512	.	+	.	ID=Dca14240.1.exon4;Parent=Dca14240.1
scaffold1670	Augustus	exon	122649	122793	.	+	.	ID=Dca14240.1.exon5;Parent=Dca14240.1
scaffold1670	Augustus	exon	122879	122994	.	+	.	ID=Dca14240.1.exon6;Parent=Dca14240.1
scaffold1670	Augustus	exon	123073	123201	.	+	.	ID=Dca14240.1.exon7;Parent=Dca14240.1
scaffold1670	Augustus	exon	123292	123465	.	+	.	ID=Dca14240.1.exon8;Parent=Dca14240.1
scaffold1670	Augustus	exon	123732	123896	.	+	.	ID=Dca14240.1.exon9;Parent=Dca14240.1
scaffold1670	Augustus	exon	124472	124612	.	+	.	ID=Dca14240.1.exon10;Parent=Dca14240.1
scaffold1670	Augustus	exon	125066	125165	.	+	.	ID=Dca14240.1.exon11;Parent=Dca14240.1
scaffold1670	Augustus	exon	125358	125466	.	+	.	ID=Dca14240.1.exon12;Parent=Dca14240.1
scaffold1670	Augustus	exon	125607	125698	.	+	.	ID=Dca14240.1.exon13;Parent=Dca14240.1
scaffold1670	Augustus	exon	125994	126084	.	+	.	ID=Dca14240.1.exon14;Parent=Dca14240.1
scaffold1670	Augustus	exon	126269	126500	.	+	.	ID=Dca14240.1.exon15;Parent=Dca14240.1
scaffold1670	Augustus	exon	126602	126694	.	+	.	ID=Dca14240.1.exon16;Parent=Dca14240.1
scaffold1670	Augustus	exon	127018	127066	.	+	.	ID=Dca14240.1.exon17;Parent=Dca14240.1
scaffold1670	Augustus	exon	127193	127286	.	+	.	ID=Dca14240.1.exon18;Parent=Dca14240.1
scaffold1670	Augustus	exon	127606	127840	.	+	.	ID=Dca14240.1.exon19;Parent=Dca14240.1