Dca16033.1
Annotation
- 3-exons
- f-1
- sp|Q75H66_ORYSJ#Putative uncharacterized protein OSJNBb0007E22.22#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0007E22.22#GO:0008270#1F0P0C
- sp|Q6AVM7_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OJ1119_H02.16#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
- Repeat List (scaffold179)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16033.1 |
3 |
454 |
518 |
32.62 |
452 |
38 |
6e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q75H66_ORYSJ |
419 |
860 |
981 |
45.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16033.1 |
10 |
501 |
518 |
33.59 |
492 |
34 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0704400-02 |
263 |
763 |
805 |
62.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold179 |
Augustus |
mRNA |
1756 |
3811 |
. |
- |
. |
ID=Dca16033.1;Parent=Dca16033 |
| scaffold179 |
Augustus |
exon |
1756 |
2044 |
. |
- |
. |
ID=Dca16033.1.exon1;Parent=Dca16033.1 |
| scaffold179 |
Augustus |
exon |
2155 |
2870 |
. |
- |
. |
ID=Dca16033.1.exon2;Parent=Dca16033.1 |
| scaffold179 |
Augustus |
exon |
3260 |
3811 |
. |
- |
. |
ID=Dca16033.1.exon3;Parent=Dca16033.1 |
