Carnation DB

Dca1608.1

Annotation

5-exons
f-1
sp|D7SLP1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g00110#unknown#0F0P0C
Repeat List (scaffold105)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1608.1	1	236	295	49.83	236	62	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|D7SLP1_VITVI	1	240	245	97.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1608.1	1	199	295	44.06	199	66	7e-70
Target_name	Start	End	Length	Cov(%)
AT1G55535.1	1	199	260	76.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold105	Augus-PASA	mRNA	94126	98077	.	-	.	ID=Dca1608.1;Parent=Dca1608
scaffold105	Augus-PASA	exon	94126	94360	.	-	.	ID=Dca1608.1.exon1;Parent=Dca1608.1
scaffold105	Augustus	exon	94938	94978	.	-	.	ID=Dca1608.1.exon2;Parent=Dca1608.1
scaffold105	Augus-PASA	exon	95314	95635	.	-	.	ID=Dca1608.1.exon3;Parent=Dca1608.1
scaffold105	Augus-PASA	exon	97693	97886	.	-	.	ID=Dca1608.1.exon4;Parent=Dca1608.1
scaffold105	Augustus	exon	97982	98077	.	-	.	ID=Dca1608.1.exon5;Parent=Dca1608.1