Carnation DB

Dca16211.1

Annotation

7-exons
f-1
sp|D7SLZ5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0021g01420#unknown#0F0P0C
sp|Q711N4_BETVU#Salt tolerance protein 1#Beta vulgaris (Sugar beet)#Name=sato1#unknown#0F0P0C
Repeat List (scaffold18)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16211.1	1	360	365	60.54	360	60	4e-81
Target_name	Start	End	Length	Cov(%)
sp\|D7SLZ5_VITVI	1	359	361	99.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16211.1	1	360	365	50.95	360	50	1e-64
Target_name	Start	End	Length	Cov(%)
AT4G17520.1	1	359	360	99.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18	Augus-PASA	mRNA	230663	234399	.	+	.	ID=Dca16211.1;Parent=Dca16211
scaffold18	Augus-PASA	exon	230663	230828	.	+	.	ID=Dca16211.1.exon1;Parent=Dca16211.1
scaffold18	Augus-PASA	exon	232017	232320	.	+	.	ID=Dca16211.1.exon2;Parent=Dca16211.1
scaffold18	Augus-PASA	exon	232417	232482	.	+	.	ID=Dca16211.1.exon3;Parent=Dca16211.1
scaffold18	Augus-PASA	exon	232599	232731	.	+	.	ID=Dca16211.1.exon4;Parent=Dca16211.1
scaffold18	Augus-PASA	exon	233420	233578	.	+	.	ID=Dca16211.1.exon5;Parent=Dca16211.1
scaffold18	Augus-PASA	exon	233682	233735	.	+	.	ID=Dca16211.1.exon6;Parent=Dca16211.1
scaffold18	Augus-PASA	exon	234184	234399	.	+	.	ID=Dca16211.1.exon7;Parent=Dca16211.1