Dca16671.1
Annotation
- 4-exons
- f-1
- sp|B9GLA4_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_750403#GO:0005507;GO:0016491#2F0P0C
- AT1G55570.1 | Symbols: sks12 | SKU5 similar 12 | chr1:20757882-20759771 FORWARD LENGTH=555
- Repeat List (scaffold183)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16671.1 |
18 |
565 |
565 |
72.74 |
548 |
75 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GLA4_POPTR |
8 |
551 |
551 |
98.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16671.1 |
22 |
563 |
565 |
69.02 |
542 |
72 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G55570.1 |
14 |
552 |
555 |
97.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold183 |
Augustus |
mRNA |
163262 |
165222 |
. |
+ |
. |
ID=Dca16671.1;Parent=Dca16671 |
| scaffold183 |
Augustus |
exon |
163262 |
163539 |
. |
+ |
. |
ID=Dca16671.1.exon1;Parent=Dca16671.1 |
| scaffold183 |
Augustus |
exon |
163627 |
164232 |
. |
+ |
. |
ID=Dca16671.1.exon2;Parent=Dca16671.1 |
| scaffold183 |
Augustus |
exon |
164305 |
164817 |
. |
+ |
. |
ID=Dca16671.1.exon3;Parent=Dca16671.1 |
| scaffold183 |
Augustus |
exon |
164922 |
165222 |
. |
+ |
. |
ID=Dca16671.1.exon4;Parent=Dca16671.1 |
