Dca17527.1
Annotation
- 4-exons
- f-1
- sp|D7LIX6_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_901062#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
- Repeat List (scaffold1895)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17527.1 |
18 |
242 |
245 |
29.79 |
225 |
32 |
2e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LIX6_ARALL |
127 |
355 |
631 |
36.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17527.1 |
15 |
238 |
245 |
28.57 |
224 |
30 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G31690.1 |
11 |
245 |
461 |
50.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1895 |
Augus-PASA |
mRNA |
26621 |
28255 |
. |
- |
. |
ID=Dca17527.1;Parent=Dca17527 |
| scaffold1895 |
Augus-PASA |
exon |
26621 |
26652 |
. |
- |
. |
ID=Dca17527.1.exon1;Parent=Dca17527.1 |
| scaffold1895 |
Augus-PASA |
exon |
27303 |
27540 |
. |
- |
. |
ID=Dca17527.1.exon2;Parent=Dca17527.1 |
| scaffold1895 |
Augustus |
exon |
27654 |
28031 |
. |
- |
. |
ID=Dca17527.1.exon3;Parent=Dca17527.1 |
| scaffold1895 |
Augustus |
exon |
28166 |
28255 |
. |
- |
. |
ID=Dca17527.1.exon4;Parent=Dca17527.1 |
