Carnation DB

Dca18234.1

Annotation

6-exons
f-1
sp|F6HEN2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g00020#unknown#0F0P0C
AT4G27060.1 | Symbols: TOR1, SPR2, CN | ARM repeat superfamily protein | chr4:13581581-13585070 REVERSE LENGTH=864
Repeat List (scaffold1939)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18234.1	43	884	887	61.66	842	61	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HEN2_VITVI	35	935	938	96.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18234.1	26	884	887	53.32	859	54	0
Target_name	Start	End	Length	Cov(%)
AT4G27060.1	19	861	864	97.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1939	Augus-PASA	mRNA	32529	37707	.	-	.	ID=Dca18234.1;Parent=Dca18234
scaffold1939	Augus-PASA	exon	32529	32726	.	-	.	ID=Dca18234.1.exon1;Parent=Dca18234.1
scaffold1939	Augustus	exon	33588	34442	.	-	.	ID=Dca18234.1.exon2;Parent=Dca18234.1
scaffold1939	Augustus	exon	34522	35093	.	-	.	ID=Dca18234.1.exon3;Parent=Dca18234.1
scaffold1939	Augustus	exon	35185	35275	.	-	.	ID=Dca18234.1.exon4;Parent=Dca18234.1
scaffold1939	Augustus	exon	35417	35608	.	-	.	ID=Dca18234.1.exon5;Parent=Dca18234.1
scaffold1939	Augustus	exon	36952	37707	.	-	.	ID=Dca18234.1.exon6;Parent=Dca18234.1