Dca18400.1
Annotation
- 3-exons
- f-1
- sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18400.1 |
1 |
1366 |
1366 |
51.75 |
1366 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B919_VITVI |
2 |
1450 |
1450 |
99.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18400.1 |
263 |
1356 |
1366 |
27.89 |
1094 |
32 |
2e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
277 |
1389 |
1401 |
79.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold195 |
Augustus |
mRNA |
88082 |
92421 |
. |
- |
. |
ID=Dca18400.1;Parent=Dca18400 |
| scaffold195 |
Augustus |
exon |
88082 |
88609 |
. |
- |
. |
ID=Dca18400.1.exon1;Parent=Dca18400.1 |
| scaffold195 |
Augustus |
exon |
88738 |
92000 |
. |
- |
. |
ID=Dca18400.1.exon2;Parent=Dca18400.1 |
| scaffold195 |
Augustus |
exon |
92112 |
92421 |
. |
- |
. |
ID=Dca18400.1.exon3;Parent=Dca18400.1 |
