Carnation DB

Dca18447.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold1953)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18447.1	1	406	603	27.03	406	40	5e-80
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	618	1022	1114	36.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18447.1	4	307	603	16.08	304	32	9e-38
Target_name	Start	End	Length	Cov(%)
Os03t0643433-00	140	443	644	47.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1953	Augustus	mRNA	15706	22036	.	+	.	ID=Dca18447.1;Parent=Dca18447
scaffold1953	Augustus	exon	15706	17103	.	+	.	ID=Dca18447.1.exon1;Parent=Dca18447.1
scaffold1953	Augustus	exon	18451	18570	.	+	.	ID=Dca18447.1.exon2;Parent=Dca18447.1
scaffold1953	Augustus	exon	19697	19825	.	+	.	ID=Dca18447.1.exon3;Parent=Dca18447.1
scaffold1953	Augustus	exon	21052	21131	.	+	.	ID=Dca18447.1.exon4;Parent=Dca18447.1
scaffold1953	Augustus	exon	21952	22036	.	+	.	ID=Dca18447.1.exon5;Parent=Dca18447.1