Dca18455.1
Annotation
- 4-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1954)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18455.1 |
1 |
62 |
243 |
18.1 |
62 |
71 |
4e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
465 |
526 |
1333 |
4.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18455.1 |
1 |
62 |
243 |
10.28 |
62 |
40 |
3e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
515 |
577 |
1428 |
4.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1954 |
Augustus |
mRNA |
650 |
2171 |
. |
- |
. |
ID=Dca18455.1;Parent=Dca18455 |
| scaffold1954 |
Augustus |
exon |
650 |
844 |
. |
- |
. |
ID=Dca18455.1.exon1;Parent=Dca18455.1 |
| scaffold1954 |
Augustus |
exon |
1169 |
1492 |
. |
- |
. |
ID=Dca18455.1.exon2;Parent=Dca18455.1 |
| scaffold1954 |
Augustus |
exon |
1635 |
1671 |
. |
- |
. |
ID=Dca18455.1.exon3;Parent=Dca18455.1 |
| scaffold1954 |
Augustus |
exon |
1996 |
2171 |
. |
- |
. |
ID=Dca18455.1.exon4;Parent=Dca18455.1 |
