Dca18510.1
Annotation
- 2-exons
- f-1
- sp|B9IQI2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1108425#GO:0008270#1F0P0C
- AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc finger family protein | chr1:27098250-27099881 FORWARD LENGTH=448
- Repeat List (scaffold196)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18510.1 |
8 |
473 |
474 |
57.17 |
466 |
58 |
1e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IQI2_POPTR |
41 |
437 |
437 |
90.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18510.1 |
8 |
473 |
474 |
52.1 |
466 |
52 |
1e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G71980.1 |
41 |
448 |
448 |
91.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold196 |
Augustus |
mRNA |
39839 |
41493 |
. |
+ |
. |
ID=Dca18510.1;Parent=Dca18510 |
| scaffold196 |
Augustus |
exon |
39839 |
40643 |
. |
+ |
. |
ID=Dca18510.1.exon1;Parent=Dca18510.1 |
| scaffold196 |
Augustus |
exon |
40874 |
41493 |
. |
+ |
. |
ID=Dca18510.1.exon2;Parent=Dca18510.1 |
