Dca1901.1
Annotation
- 4-exons
- f-1
- sp|Q2QQ28_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g32440#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold1061)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1901.1 |
110 |
301 |
301 |
27.9 |
192 |
31 |
2e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QQ28_ORYSJ |
340 |
600 |
829 |
31.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1061 |
Augustus |
mRNA |
62521 |
65005 |
. |
+ |
. |
ID=Dca1901.1;Parent=Dca1901 |
| scaffold1061 |
Augustus |
exon |
62521 |
62665 |
. |
+ |
. |
ID=Dca1901.1.exon1;Parent=Dca1901.1 |
| scaffold1061 |
Augustus |
exon |
63560 |
63805 |
. |
+ |
. |
ID=Dca1901.1.exon2;Parent=Dca1901.1 |
| scaffold1061 |
Augustus |
exon |
63904 |
64052 |
. |
+ |
. |
ID=Dca1901.1.exon3;Parent=Dca1901.1 |
| scaffold1061 |
Augustus |
exon |
64640 |
65005 |
. |
+ |
. |
ID=Dca1901.1.exon4;Parent=Dca1901.1 |
