Carnation DB

Dca19179.1

Annotation

5-exons
f-1
sp|F6I314_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02030#GO:0008270#1F0P0C
sp|B9RC56_RICCO#Cleavage and polyadenylation specificity factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1685450#GO:0008270#1F0P0C
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19179.1	16	332	335	46.26	317	46	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|F6I314_VITVI	40	378	382	88.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19179.1	17	324	335	42.08	308	45	3e-70
Target_name	Start	End	Length	Cov(%)
AT4G11680.1	68	382	390	80.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	1134990	1136976	.	+	.	ID=Dca19179.1;Parent=Dca19179
scaffold2	Augustus	exon	1134990	1135426	.	+	.	ID=Dca19179.1.exon1;Parent=Dca19179.1
scaffold2	Augustus	exon	1136120	1136239	.	+	.	ID=Dca19179.1.exon2;Parent=Dca19179.1
scaffold2	Augustus	exon	1136330	1136465	.	+	.	ID=Dca19179.1.exon3;Parent=Dca19179.1
scaffold2	Augustus	exon	1136552	1136692	.	+	.	ID=Dca19179.1.exon4;Parent=Dca19179.1
scaffold2	Augustus	exon	1136803	1136976	.	+	.	ID=Dca19179.1.exon5;Parent=Dca19179.1