Carnation DB

Dca1923.1

Annotation

5-exons
f-1
sp|Q5GA69_SOLLC#Putative polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
Repeat List (scaffold1062)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1923.1	37	362	369	49.05	326	52	2e-82
Target_name	Start	End	Length	Cov(%)
sp\|Q5GA69_SOLLC	16	342	687	47.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1923.1	2	343	369	34.95	342	32	1e-39
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	645	1042	1401	28.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1062	Augustus	mRNA	57750	60067	.	+	.	ID=Dca1923.1;Parent=Dca1923
scaffold1062	Augustus	exon	57750	57907	.	+	.	ID=Dca1923.1.exon1;Parent=Dca1923.1
scaffold1062	Augustus	exon	58049	58515	.	+	.	ID=Dca1923.1.exon2;Parent=Dca1923.1
scaffold1062	Augustus	exon	58587	58998	.	+	.	ID=Dca1923.1.exon3;Parent=Dca1923.1
scaffold1062	Augustus	exon	59623	59666	.	+	.	ID=Dca1923.1.exon4;Parent=Dca1923.1
scaffold1062	Augustus	exon	60039	60067	.	+	.	ID=Dca1923.1.exon5;Parent=Dca1923.1