Carnation DB

Dca1998.1

Annotation

5-exons
f-1
sp|B9SE20_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1482450#GO:0043531;GO:0006952#1F1P0C
sp|C6FF62_SOYBN#CC-NBS-LRR class disease resistance protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0043531;GO:0005524;GO:0017111;GO:0006952#3F1P0C
Repeat List (scaffold1065)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1998.1	1	97	1315	2.81	97	38	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|B9SE20_RICCO	852	949	985	9.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1998.1	1	82	1315	2.43	82	39	2e-08
Target_name	Start	End	Length	Cov(%)
AT1G58390.1	788	870	907	9.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1065	Augustus	mRNA	40998	46563	.	-	.	ID=Dca1998.1;Parent=Dca1998
scaffold1065	Augustus	exon	40998	42291	.	-	.	ID=Dca1998.1.exon1;Parent=Dca1998.1
scaffold1065	Augustus	exon	42658	44260	.	-	.	ID=Dca1998.1.exon2;Parent=Dca1998.1
scaffold1065	Augustus	exon	45334	45782	.	-	.	ID=Dca1998.1.exon3;Parent=Dca1998.1
scaffold1065	Augustus	exon	45874	46031	.	-	.	ID=Dca1998.1.exon4;Parent=Dca1998.1
scaffold1065	Augustus	exon	46120	46563	.	-	.	ID=Dca1998.1.exon5;Parent=Dca1998.1