Carnation DB

Dca20285.1

Annotation

5-exons
f-1
sp|D6BR64_9ROSI#Putative uncharacterized protein#Jatropha curcas#unknown#GO:0016021#0F0P1C
Os12t0633200-01 Erg28-like family protein.
Repeat List (scaffold208)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20285.1	1	72	93	54.83	72	64	2e-19
Target_name	Start	End	Length	Cov(%)
sp\|D6BR64_9ROSI	1	80	129	62.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20285.1	1	54	93	46.23	54	80	2e-19
Target_name	Start	End	Length	Cov(%)
Os12t0633200-01	7	60	140	38.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold208	Augus-PASA	mRNA	5593	8569	.	+	.	ID=Dca20285.1;Parent=Dca20285
scaffold208	Augus-PASA	exon	5593	5707	.	+	.	ID=Dca20285.1.exon1;Parent=Dca20285.1
scaffold208	Augustus	exon	7213	7260	.	+	.	ID=Dca20285.1.exon2;Parent=Dca20285.1
scaffold208	Augustus	exon	7377	7419	.	+	.	ID=Dca20285.1.exon3;Parent=Dca20285.1
scaffold208	Augus-PASA	exon	8351	8424	.	+	.	ID=Dca20285.1.exon4;Parent=Dca20285.1
scaffold208	Augus-PASA	exon	8508	8569	.	+	.	ID=Dca20285.1.exon5;Parent=Dca20285.1