Dca2124.1
Annotation
- 4-exons
- f-1
- sp|B9H570_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558577#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- sp|B9STF3_RICCO#Serine-threonine protein kinase, plant-type, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1318870#GO:0016021;GO:0032440;GO:0005524;GO:0004674#3F0P1C
- Repeat List (scaffold107)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2124.1 |
6 |
301 |
498 |
34.93 |
296 |
55 |
5e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H570_POPTR |
687 |
1006 |
1011 |
31.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2124.1 |
8 |
305 |
498 |
32.53 |
298 |
50 |
3e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0215900-01 |
1 |
328 |
330 |
99.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold107 |
Augustus |
mRNA |
195387 |
201160 |
. |
+ |
. |
ID=Dca2124.1;Parent=Dca2124 |
| scaffold107 |
Augustus |
exon |
195387 |
195975 |
. |
+ |
. |
ID=Dca2124.1.exon1;Parent=Dca2124.1 |
| scaffold107 |
Augustus |
exon |
196546 |
196893 |
. |
+ |
. |
ID=Dca2124.1.exon2;Parent=Dca2124.1 |
| scaffold107 |
Augustus |
exon |
198137 |
198259 |
. |
+ |
. |
ID=Dca2124.1.exon3;Parent=Dca2124.1 |
| scaffold107 |
Augustus |
exon |
200724 |
201160 |
. |
+ |
. |
ID=Dca2124.1.exon4;Parent=Dca2124.1 |
